List of Lipidomics Tools & Databases

Biswapriya B. Misra , February 05 at 13:13
B
Biswapriya B. Misra
Hi All,

​Over the past 4-5 years, as an enthusiast, I have been collecting DBs, softwares and resources for metabolomics and lipidomics, and here I am posting them all such that these can be added to the "Resources" as well!

Tool Name,Type-Dependence,Availability
LipidPro,"Standalone, Windows",http://www.neurogenetics. biozentrum.uni-wuerzburg.de/en/project/services/l ipidpro/​
SwissLipids,Web,http://www.swisslipids.org/​
LOBSTAHS,R,https://github.com/vanmooylipidomics/LOBSTAHS​
LipidCCS,Webserver,http://www.metabolomics-shanghai.org/LipidCCS/​
LipidHunter,Python,https://bitbucket.org/SysMedOs/lipidhunter​
LipidCircos,Python,https://bitbucket.org/SysMedOs/lipidcircos​
LIPEA,Web,https://lipea.biotec.tu-dresden.de/home​
LipidPedia,Web,lipidpedia.cmdm.tw​
LipidQC,Excel,http://secim.ufl.edu/secim-tools/lipidqc/​
LipSpin,Matlab ,https://github.com/rbarri/LipSpin​
LipiDex,Java,https://github.com/coongroup/LipiDex​
LipidFinder,Web,http://www.lipidmaps.org/data/LF/​
LION/web,Web,http://www.lipidontology.com/​
LipidIMMS Analyzer,Web,http://imms.zhulab.cn/LipidIMMS/​
LAS,Web,http://ceumass.eps.uspceu.es/prolog_batch_advanced_search.xhtml​
lipyd,Python,https://github.com/saezlab/lipyd​
Lipid Mini-On,Web,https://omicstools.pnnl.gov/shiny/lipid-mini-on/​
LipostarMSI,Standalone,https://www.molhorizon.it/software/​
LipidXte,"Standalone, Java",http://lipidxte.mpi-cbg.de/​
LipidLynxX,"Python, Standalone ",http://lipidmaps.org/lipidlynxx/​
lipidr,R,https://www.lipidr.org/​
LiPydomics,"Python, HTML",https://github.com/dylanhross/lipydomics​
LipidCreator,"C#, HTML, Skyline plugin",https://github.com/lifs-tools/lipidcreator​
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Hope these help adding to the resources. Appended the spreadsheet as well! ​

Best regards,

Biswa